broadinstitute/gatk:latest

Manifest digest

sha256:c88912855b845bd40c6b4bc8f3dd1d4b333ed2549cd3e8386987ee7c0c284f5a

OS/ARCH

linux/amd64

Compressed size

2.22 GB

Last pushed

5 months by lbergelson

Type

Image

Manifest digest

sha256:c88912855b845bd40c6b4bc8f3dd1d4b333ed2549cd3e8386987ee7c0c284f5a

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 29.03 MB

6CMD ["/bin/bash"]0 B

7ENV DEBIAN_FRONTEND=noninteractive HOME=/root JAVA_LIBRARY_PATH=/usr/lib/jni0 B

8WORKDIR /root0 B

9/bin/sh -c apt update &&527.85 MB

10CMD ["bash"]0 B

11/bin/sh -c rm /etc/apt/sources.list.d/google-cloud-sdk.list &&462 B

12WORKDIR /gatk127 B

13/bin/sh -c chmod -R a+rw93 B

14COPY dir:0d4e154cd4f1b32329b218f4f346e3cc1d12ad8b2e1e8fb7625a66f9eeb1017c in . 661.26 MB

15/bin/sh -c ln -s $(188 B

16WORKDIR /root0 B

17/bin/sh -c java -jar gatk.jar273 B

18WORKDIR /gatk0 B

19ENV CI=true0 B

20/bin/sh -c echo "source activate555 B

21/bin/sh -c cp -r /root/run_unit_tests.sh582 B

22

ENV CLASSPATH=/gatk/gatk.jar: PATH=/opt/miniconda/envs/gatk/bin:/opt/miniconda/bin:/opt/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

23/bin/sh -c conda env create1.03 GB

24CMD ["bash" "--init-file" "/gatk/gatkenv.rc"]0 B

25

ENV PATH=/gatk:/opt/miniconda/envs/gatk/bin:/opt/miniconda/bin:/opt/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

Command

 ARG RELEASE