genebeam/vep:latest

Manifest digest

sha256:8e5b61fd5c8adabf71f26fea2ebbe09c000e854e5b7753e165c61eba7da18667

OS/ARCH

linux/amd64

Compressed size

245.83 MB

Last pushed

almost 4 years by pstawinski

Type

Image

Manifest digest

sha256:8e5b61fd5c8adabf71f26fea2ebbe09c000e854e5b7753e165c61eba7da18667

Image Layers

1ADD file ... in / 25.47 MB

2/bin/sh -c set -xe &&850 B

3/bin/sh -c [ -z "$(apt-get0 B

4/bin/sh -c mkdir -p /run/systemd162 B

5CMD ["/bin/bash"]0 B

6/bin/sh -c apt-get update &&99.83 MB

7ENV OPT=/opt/vep0 B

8ENV OPT_SRC=/opt/vep/src0 B

9ENV PERL5LIB_TMP=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules0 B

10ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules:/opt/vep/src/bioperl-live0 B

11ENV KENT_SRC=/opt/vep/src/kent-335_base/src0 B

12ENV HTSLIB_DIR=/opt/vep/src/htslib0 B

13ENV MACHTYPE=x86_640 B

14ENV DEPS=/opt/vep/src0 B

15ENV PATH=/opt/vep/src/ensembl-vep:/opt/vep/src/var_c_code:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

16ENV LANG_VAR=en_US.UTF-80 B

17/bin/sh -c useradd -r -m4.33 KB

18USER vep0 B

19COPY --chown=vep:vepdir:b0fead89ab851826126ece5ebef2bee5768594c1beadaade0972b8c9eeb94636 in /opt/vep/src 60.32 MB

20USER root0 B

21WORKDIR /opt/vep/src/bioperl-ext/Bio/Ext/Align/0 B

22/bin/sh -c perl Makefile.PL &&1.15 MB

23WORKDIR /opt/vep/src/ensembl-xs0 B

24/bin/sh -c perl Makefile.PL &&443.21 KB

25WORKDIR /opt/vep/src0 B

26/bin/sh -c ensembl-vep/travisci/build_c.sh && 54.41 MB

27ENV LC_ALL=en_US.UTF-80 B

28ENV LANG=en_US.UTF-80 B

29USER vep0 B

30ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules0 B

31WORKDIR /opt/vep/src/ensembl-vep0 B

32/bin/sh -c echo >> $OPT/.profile4.2 MB

33/bin/sh -c perl INSTALL.pl --AUTO10.2 KB

Command

ADD file:d65963eb4f4b3a8c8e57119725a91036e8932a3e8f604e7edc21ff9665472da9 in /