mblanche/chicago:latest

Manifest digest

sha256:7dd723abd5f656679b75914a57f681a5085ec3f6e5b2980a4c8ee0541074718a

OS/ARCH

linux/amd64

Compressed size

452.97 MB

Last pushed

about 5 years by mblanche

Type

Image

Manifest digest

sha256:7dd723abd5f656679b75914a57f681a5085ec3f6e5b2980a4c8ee0541074718a

Image Layers

1ADD file ... in / 27.24 MB

2CMD ["bash"]0 B

3USER root0 B

4ENV DEBIAN_FRONTEND=noninteractive0 B

5/bin/sh -c apt-get update -y150.15 MB

6/bin/sh -c wget -qO- https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc136.05 MB

7/bin/sh -c apt-get clean 838 B

8/bin/sh -c /usr/bin/R -e 'options(Ncpus325.58 KB

9/bin/sh -c /usr/bin/R -e 'options(Ncpus81.46 MB

10/bin/sh -c /usr/bin/R -e 'options(Ncpus92 B

11/bin/sh -c wget https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools.static.binary 13.48 MB

12/bin/sh -c wget https://raw.githubusercontent.com/dovetail-genomics/chicago/main/chicagoTools/bam2chicago.sh 2.56 KB

13/bin/sh -c wget https://raw.githubusercontent.com/dovetail-genomics/chicago/main/chicagoTools/makeDesignFiles_py3.py2.84 KB

14COPY file:509e35e8d3c40aacc968cb3f431b3e519021150c1f2487918177270af2b8d6aa in /usr/bin/prep4Chicago 1.12 KB

15/bin/sh -c chmod 755 /usr/bin/prep4Chicago1.11 KB

16/bin/sh -c /usr/bin/R -e 'options(Ncpus44.26 MB

17/bin/sh -c wget https://raw.githubusercontent.com/dovetail-genomics/chicago/main/chicagoTools/runChicago.R 4.83 KB

Command

ADD file:524e8d93ad65f08a0cb0d144268350186e36f508006b05b8faf2e1289499b59f in /