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Last pushed: a year ago
Short Description
rocker/shiny + fslr + brainR + FSL
Full Description


Example of an RStudio Shiny app navigating MRI images.


  • Augment rocker/shiny docker image with R brain imaging libraries like BrainR, fslr, etc.
  • Shiny docker container run like (from within app dir):
    $ docker run -d -v $(pwd -P):/srv/shiny-server/shiny-brain -p 3838:3838 andypohl/shiny-brain
    (going to http://docker-ip:3838/shiny-brain runs the app)
  • the app/ subdirectory contains everything for the app apart from data.
  • the data (NIfTI images), should go in the app/data directory.
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