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docker-meyerslab

Repository for managing Dockerfile and Agave apps associated with Meyers lab applications

02.17.2015: Contains Python scripts and dependencies to run miRferno and sPARTA miRNA analysis codes from Meyers Lab at University of Delaware.
Source: http://mpss.udel.edu/tools/mirna_apps/download.php

03.02.2015: Updated with working Agave apps. The .bashx scripts are Agave script templates. The *job.json scripts are sample jobs to exercise the applications. The other JSON files contain the application metadata.

Agave app list

  • mirferno-feature-file-1.07u2
  • sparta-reference-genome-1.07u1
  • mirferno-reference-genome-1.07u2
  • sparta-feature-file-1.07u2
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araport

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