“Cuffdiff” - used to find significant changes in transcript expression, splicing, and promoter use.
-Tool Version Cuffdiff (Program of Cufflinks): 2.1.1
- Working with Dockerized Cuffdiff: Follow bellow steps to run Cuffdiff image from Docker Hub.
Pull Cuffdiff image from Docker Hub
# sudo docker pull bd2kbdds/cuffdiff
Build the image
# sudo docker build -t bd2kbdds/cuffdiff
Run the image
# sudo docker run -i -t bd2kbdds/cuffdiff
How to run Cuffdiff?
Look at: http://cole-trapnell-lab.github.io/cufflinks/cuffdiff/
Docker Pull Command