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Last pushed: 2 years ago
Short Description
BiBiServ : JAli
Full Description

This image contains a complete JAli installation available at /usr/local/bin and is used by any
BiBiServ cloud instance to provide tool access.

(example) usage :

docker run -v [LOCALDIR]:/data bibiserv/jali /usr/local/bin/jali -w /usr/local/bin/jali_/blosum62 -i -24 -e -6 -j -22 -p /data/sequence.fas /data/alignment.fas

(mapping LOCALDIR to /data and using blosum62 matrix)

See for a description and reference list.

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