Public Repository

Last pushed: a year ago
Short Description
version v1.0
Full Description

#----------------------------------------------------------------------------------
Freebayes Dockerfile
Remember to put the dockerfile in the same directory of Freebayes
Versions: Freebayes:v1.0.2-16

#----------------------------------------------------------------------------------

FROM ubuntu:16.04

WORKDIR /home

RUN apt-get update && apt-get install -y\
build-essential\
cmake\
zlib1g-dev\
libncurses-dev\
git

#----------------------------------------------------------------------------------

#Let's build Freebayes!

#----------------------------------------------------------------------------------

RUN mkdir /home/freebayes

ADD . /home/freebayes

WORKDIR /home/freebayes/freebayes_v1.0.2-16

RUN make

RUN ln -s /home/freebayes/freebayes_v1.0.2-16/bin/freebayes /usr/local/bin

#----------------------------------------------------------------------------------

ENV HELP='usage: freebayes -f [REFERENCE] [OPTIONS] [BAM FILES] >[OUTPUT]'

CMD echo $HELP

Docker Pull Command
Owner
bmslab

Comments (0)