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###################
# Dockerfile to build GeneTorrent 
# Modified from https://hub.docker.com/r/seqware/pancancer_upload_download/~/dockerfile/ by Brain O'Connor
##############

FROM ubuntu:12.04

MAINTAINER brandi davis-dusenbery <brandi@sbgenomics.com>

######## BEGIN INSTALLATION

# update and install wget 

RUN apt-get update && apt-get install -y wget

# download genetorrent and dependencies

RUN cd /opt && wget -t 5 --timeout=5 --no-check-certificate https://cghub.ucsc.edu/software/downloads/GeneTorrent/3.8.6/ genetorrent-download_3.8.6-ubuntu2.130-12.04_amd64.deb
RUN cd /opt && wget -t 5 --timeout=5 --no-check-certificate https://cghub.ucsc.edu/software/downloads/GeneTorrent/3.8.6/genetorrent-common_3.8.6-ubuntu2.130-12.04_amd64.deb
RUN cd /opt && wget -t 5 --timeout=5 --no-check-certificate https://cghub.ucsc.edu/software/downloads/GeneTorrent/3.8.6/genetorrent-upload_3.8.6-ubuntu2.130-12.04_amd64.deb
RUN apt-get update && apt-get install -y libcurl3 libxqilla6 python
RUN apt-get update && apt-get install -y libboost-program-options1.48.0 libboost-system1.48.0  libboost-filesystem1.48.0 libboost-regex1.48.0
RUN apt-get update && apt-get install -y rsync 

# install genetorrent 
RUN cd /opt && dpkg --install genetorrent-download_3.8.6-ubuntu2.130-12.04_amd64.deb genetorrent-common_3.8.6-ubuntu2.130-12.04_amd64.deb genetorrent-upload_3.8.6-ubuntu2.130-12.04_amd64.deb
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