Public | Automated Build

Last pushed: 17 days ago
Short Description
Preprocessing pipeline for ATAC and scATAC data
Full Description

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This package is maintained by Caleb Lareau in the
Buenrostro Lab. Source code is made freely available
and a packaged install version is provided through PyPi.
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About

The proatac package implements our data processing and quality control pipeline bulk
ATAC-Seq,
single cell ATAC-Seq,
and droplet-based ATAC-Seq data.
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Workflow Overview

A detailed description of the workflow including a description of various parameter
settings is discussed in depth in the proatac documentation.
Below is a brief overview of


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Installation/Documentation/FAQ/.etc

Check out the proatac documentation for detailed
installation instructions, dependency configuration, and other
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Questions/comments/feedback

are always welcomed. The easiest way for us to have correspondence (if appropriate/interesting
for the public) is through raising a new issue
on the GitHub source. For private concerns, email Caleb.
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proatac logo made freely with logomakr these
blue and red
color definitions.
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Owner
buenrostolab
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