Docker image for our Qiime pipeline.
Get it with
docker pull cdiener/qiime-docker
For a version that has the R kernel and DADA2 installed as well use
docker pull cdiener/qiime-docker:dada2
Than run with
docker run -p 8888:8888 cdiener/qiime-docker
and open you browser at http://localhost:8888.
For advanced usage the image also supports all jupyter minimal-notebook environment variables such as enabling HTTPS and
specifying a password. See here for more infos.