Public Repository

Last pushed: 2 years ago
Short Description
Anduril 1.2.23 base image
Full Description

anduril-base

Anduril workflow engine (version 1.2) built on top of Debian Wheezy.

Installation

Via Dockerhub

docker pull cfrech/anduril-base

Total image size is ~7 Gb, so download may take a while.

Via Dockerfile

git clone https://github.com/Gig77/anduril-base/
cd anduril-base
docker build -t cfrech/anduril-base .

Installation via Dockerfile takes 2-3 hours due to many Debian and R packages being installed.

Test

docker run --rm -u anduril cfrech/anduril-base anduril --version

Bundles

  • Installed: Microarray Tools Sequencing
  • Not installed: Anima GROK CookBook TCGA
  • Not installed: Moksiskaan (available soon as derived image)

Configuration

  • Anduril 1.2.23
  • Debian 7.8
  • R 3.2.0 (2015-04-16)
  • Bioconductor 3.1 (BiocInstaller 1.18.2)
  • Locale en_US.UTF-8

Features

  • Password-less login with user anduril (sudoer)

Reference

  • Kristian Ovaska, Marko Laakso et al. Large-scale data integration framework provides a comprehensive view on glioblastoma multiforme. Genome Medicine 2010, 2:65.
  • http://www.anduril.org/anduril/site/
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Owner
cfrech