BioInterchange makes genomic data scaling and data integration easy.
Genomic data comes in files, which is pretty awesome, if you are a file system! For data scientists or bioinformaticians it is an unnecessary hurdle to get to the juicy data though.
BioInterchange gets you to the data straightaway:
- one easy-to-read data model to multiple genomics standards (GFF3, GVF, VCF)
- high-performance data access via Python API that outperforms BioPython and BioRuby
- data integration into RethinkDB, MongoDB, PostgreSQL, Elasticseach, etc., via JSON
- more data integration into RDF triple stores via JSON-LD
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