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Last pushed: a year ago
Short Description
Open-Source Programs for 16S analysis
Full Description

Includes programs from cwarden45/genomics-base as well as:

mothur (v1.38.0, set in $PATH)
RDPclassifier (2.11, /opt/rdp_classifier_2.11/dist/classifier.jar)
QIIME (v1.9.1, configured enough to run join_paired_ends.py, split_libraries_fastq.py, and assign_taxonomy.py)
--> RDPclassifier (v2.2, configured for QIIME)
--> legacy BLAST (v2.2.22, in addition to BLAST+)
--> ea-utils
--> SeqPrep
biopython (v1.68, set in $PATH)

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cwarden45