A Linux-based Docker container with Cufflinks for Transcriptome assembly and differential expression analysis for RNA-Seq.
A Linux-based Docker container with Cufflinks.
- Ubuntu base
Specific versions and sources are made clear in the Dockerfile.
Intended to be used with data in
To pull and run first time.
docker run -v /data:/data -itd fomightez/rnaseqcufflinks
You may need to change first
/data in that command to match path to your directory.
It starts detached and so you need to attach it; alternatively, use
docker run -v /data:/data -it fomightez/rnaseqcufflinks to start and attach immediately.