g2nb/workspace

Genomics to Notebook (g2nb) Workspace

g2nb combines the accessibility and research narrative capabilities of Jupyter⁠ with the genomics tools available in Galaxy⁠, GenePattern⁠, and other popular bioinformatics platforms, adding many features for ease of use by non-programming scientists.

This image is used to host a multi-user g2nb Workspace instance, based on JupyterHub.

Using the Image

To use this image, we recommend downloading and running it through our start script⁠.

Alternatively, pull the image and then run it, mapping port 80 to an outside port. To preserve your files between runs or use custom config, map /data to a directory on the host

docker pull g2nb/workspace
docker run --rm -p 80:80 -v ~:/data g2nb/workspace

Source Code

This project is open source under the BSD-3-Clause⁠ license. You can find the complete code under our GitHub organization⁠.

Docker Pull Command

docker pull g2nb/workspace