genomehubs/sequenceserver repository overview

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Sets up an SequenceServer⁠ BLAST server with support for various customisations. Uses the latest master branch which comes with one or two bugs (e.g. it may be necessary to manually refresh the results page after running a search) but a great user interface and result visualisation.

docker run -d \
           --name genomehubs-sequenceserver \
           -v ~/demo/genomehubs-mirror/blast/conf:/conf \
           -v ~/demo/genomehubs-mirror/blast/data:/dbs \
           -p 8083:4567 \
           genomehubs/sequenceserver:latest

Files in a directory mounted to /conf will be used as follows:

• sequenceserver.conf overwrites the standard SequenceServer configuration options
• Masthead.html is added as a masthead on every page
• custom.css can be applied to the Masthead or any other page element
• links.rb specifies how to parse the sequence IDs to generate links back to the Ensembl site, and the base url for that site.