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Last pushed: a month ago
Short Description
DASTool
Full Description

Custom image of DASTool
Use at own risk
For description see https://github.com/cmks/DAS_Tool and cite their paper

#v1.1.0 (git commit ceabdc0)

only run with --search_engine blast (others not implemented)

Example usage:
docker run -u $(id -u):$(id -g) -v /path/to/input/:/workdata -v /path/to/contigs/:/contigs gerners/dastool -i /workdata/concoct_contigs2bin.tsv,/workdata/maxbin_contigs2bin.tsv,/workdata/metabat_contigs2bin.tsv -l concoct,maxbin,metabat -c /contigs/contigs.fa -o /workdata/DASTool_out --threads 10 --search_engine blast

#v1.0.0 (git commit 97990da)

only run with --search_engine diamond or blast (others not implemented)

Example usage:
docker run -u $(id -u):$(id -g) -v /path/to/input/:/workdata -v /path/to/contigs/:/contigs gerners/dastool:1.0.0 -i /workdata/concoct_contigs2bin.tsv,/workdata/maxbin_contigs2bin.tsv,/workdata/metabat_contigs2bin.tsv -l concoct,maxbin,metabat -c /contigs/contigs.fa -o /workdata/DASTool_out --threads 10 --search_engine diamond

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gerners

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