giesselmann/strique repository overview

⁠STRique

STRique is a python package to analyze repeat expansion and methylation states of short tandem repeats (STR) in Oxford Nanopore Technology (ONT) long read sequencing data.

Please refer to the documentation⁠ for installation and usage instructions.

To get started the installation⁠ chapter describes the available installation options depending on the operation system and already existing environments.

In the Usage⁠ chapter the stepwise analysis of nanopore reads covering repeat expansions is demonstrated.

⁠Citation

If you use STRique in your work please cite: