gjhunt/rr

By gjhunt

Updated over 5 years ago

Reproducible analysis for RR paper.

Image

100

gjhunt/rr repository overview

re-make plots and copy to current directory (takes ~5 minutes to run)

docker run -it --rm --mount type=bind,source=$(pwd),destination=/output/ gjhunt/rr make plots

re-make all analysis and plots and copy to current directory (takes about ~1 day to run)

docker run -it --rm --mount type=bind,source=$(pwd),destination=/output/ gjhunt/rr make analysis

to copy all files to current working directory without re-running

docker run --name rr-tmp gjhunt/rr /bin/true

docker cp rr-tmp:MCF10A .

docker cp rr-tmp:rrscale_0.1.1.tar.gz .

docker cp rr-tmp:makefile .

docker rm -v rr-tmp

Docker Pull Command

docker pull gjhunt/rr