Public Repository

Last pushed: 2 years ago
Short Description
Data and R code for analysis of global transcriptional response to heat shock
Full Description

When started the container will run the analysis that underlies the results in "Characterisation of the global transcriptional response to heat shock and the impact of individual genetic variation". Output of the analysis as well as all R code used is available via a web page (on port 80) once the analysis is complete. The container also runs an instance of RStudio (on port 8787) which allows an interactive exploration of the data.

Since the analysis may run for several hours it can be useful to map the cache directory used to store intermediate results to the host file system:
-v <host_directory>:/analysis/heatshock_analysis_cache.

All scripts used in the analysis are also available via a GitHub repository.

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