Public Repository

Last pushed: a year ago
Short Description
Short description is empty for this repo.
Full Description

Summary

  • This image contains metaphlan and its dependencies. It contains scripts that can run till step 3 in this tutorial (https://bitbucket.org/nsegata/metaphlan/wiki/MetaPhlAn_Pipelines_Tutorial).
  • Utility scripts are in /scripts.
  • Remeber to edit download_samples.sh first to determine which samples to use.
  • Remeber to edit profile_samples.sh first to determine which samples to use.

Corresponding scripts to each steps of the tutorial:

  • Step 1: ./download_samples.sh then ./profile_samples.sh
  • Step 2: ./heatmap.sh
  • Step 3: ./graphlan_images_gen.sh
Docker Pull Command
Owner
immortaltw

Comments (0)