Public | Automated Build

Last pushed: 3 years ago
Short Description
KBase Runtime (Automated build)
Full Description

KBase Bootstrap Repository

This repository adds 3rd party dependencies to an Ubuntu image.
This includes specific versions of various programming languages
and associated libraries.


  • repos.list
  • subdirectories

This is the master install script. This does the extra work of
installing ssh keys and some customizations to apt before calling

This script does the primary work of adding 3rd party dependencies
to the Ubuntu image. First, we add the Aptitude packages listed in
kb_bootstrap/package-list.ubuntu using the install-debian-packages

Next we install several languages and libraries that are not easy
to install properly using Aptitude:

  • kb_golang_runtime: Install the Go programming language
  • kb_hadoop_setup: Setup Hadoop dependencies
  • kb_java_runtime: Install the Java programming language
  • kb_node_runtime: Install the Node programming language
  • kb_perl_runtime: Install the Perl programming language
  • kb_python_runtime: Install the Python programming language
  • kb_qiime: Install Quantitative Insights Into Microbial Ecology
    (QIIME) software package
  • kb_thrift_runtime: Install Apache Thrift RPC language interface

Software With Restricted Redistribution Rights

Software with restricted redistribution rights will need to be downloaded
by the end user manually. During the bootstrap process software affected
by these restrictions will print out a warning message.

Once you aquire the affected restricted software, run "export restricted"
before running the script to enable the installation of
restricted software.

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