Public Repository

Last pushed: a day ago
Short Description
SomaticSeq: an ensemble approach with machine learning to accurately detect somatic mutations
Full Description

SomaticSeq is an ensemble caller that has the ability to use machine learning to filter out false positives. The callers we have incorporated into SomaticSeq are MuTect2/MuTect/Indelocator, VarScan2, JointSNVMix2, SomaticSniper, VarDict, MuSE, LoFreq, Scalpel, Strelka2, and/or TNscope.
The detailed documentation is included in the repository

Docker Pull Command