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Last pushed: a year ago
Short Description
Galaxy Docker
Full Description

docker-galaxy-bit

Galaxy Docker Container

version 0.3.0

docker run -e RUNUSER_UID=10000 -e RUNUSER_GID=10000  -p 8080:8080 --rm manabuishii/docker-galaxy-bit:0.3.0

TEST YOUR OWN TOOL

docker run -v $PWD/shareddatadirectory/hellogalaxy:/tmp/hellogalaxy -v $PWD/shareddatadirectory/tools/hellogalaxy:/home/galaxy/galaxy-15.07/tools/hellogalaxy -v $PWD/shareddatadirectory/config/tool_conf.xml:/home/galaxy/galaxy-15.07/config/tool_conf.xml -e RUNUSER_UID=10000 -e RUNUSER_GID=10000  -p 8080:8080 --rm manabuishii/docker-galaxy-bit:0.2.0

Clear job working directory

rm -rf shareddatadirectory/job_working_directory/000
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manabuishii
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