Public Repository

Last pushed: a month ago
Short Description
Raincloud, my bioinformatics repo for use with Digital Ocean cloud servers
Full Description

Command line tools:
RADmeth

R packages:
acepack "acepack" "/usr/local/lib/R/site-library"
AnnotationDbi "AnnotationDbi" "/usr/local/lib/R/site-library"
assertthat "assertthat" "/usr/local/lib/R/site-library"
BH "BH" "/usr/local/lib/R/site-library"
Biobase "Biobase" "/usr/local/lib/R/site-library"
BiocGenerics "BiocGenerics" "/usr/local/lib/R/site-library"
BiocInstaller "BiocInstaller" "/usr/local/lib/R/site-library"
bsseq "bsseq" "/usr/local/lib/R/site-library"
car "car" "/usr/local/lib/R/site-library"
chron "chron" "/usr/local/lib/R/site-library"
cluster "cluster" "/usr/local/lib/R/site-library"
coda "coda" "/usr/local/lib/R/site-library"
colorspace "colorspace" "/usr/local/lib/R/site-library"
curl "curl" "/usr/local/lib/R/site-library"
data.table "data.table" "/usr/local/lib/R/site-library"
DBI "DBI" "/usr/local/lib/R/site-library"
dichromat "dichromat" "/usr/local/lib/R/site-library"
digest "digest" "/usr/local/lib/R/site-library"
docopt "docopt" "/usr/local/lib/R/site-library"
doParallel "doParallel" "/usr/local/lib/R/site-library"
dplyr "dplyr" "/usr/local/lib/R/site-library"
DSS "DSS" "/usr/local/lib/R/site-library"
dynamicTreeCut "dynamicTreeCut" "/usr/local/lib/R/site-library"
estimability "estimability" "/usr/local/lib/R/site-library"
fastcluster "fastcluster" "/usr/local/lib/R/site-library"
foreach "foreach" "/usr/local/lib/R/site-library"
Formula "Formula" "/usr/local/lib/R/site-library"
GenomeInfoDb "GenomeInfoDb" "/usr/local/lib/R/site-library"
GenomicRanges "GenomicRanges" "/usr/local/lib/R/site-library"
ggplot2 "ggplot2" "/usr/local/lib/R/site-library"
GO.db "GO.db" "/usr/local/lib/R/site-library"
gridExtra "gridExtra" "/usr/local/lib/R/site-library"
gtable "gtable" "/usr/local/lib/R/site-library"
gtools "gtools" "/usr/local/lib/R/site-library"
Hmisc "Hmisc" "/usr/local/lib/R/site-library"
hms "hms" "/usr/local/lib/R/site-library"
impute "impute" "/usr/local/lib/R/site-library"
IRanges "IRanges" "/usr/local/lib/R/site-library"
iterators "iterators" "/usr/local/lib/R/site-library"
labeling "labeling" "/usr/local/lib/R/site-library"
latticeExtra "latticeExtra" "/usr/local/lib/R/site-library"
lazyeval "lazyeval" "/usr/local/lib/R/site-library"
limma "limma" "/usr/local/lib/R/site-library"
lme4 "lme4" "/usr/local/lib/R/site-library"
locfit "locfit" "/usr/local/lib/R/site-library"
lsmeans "lsmeans" "/usr/local/lib/R/site-library"
magrittr "magrittr" "/usr/local/lib/R/site-library"
MatrixModels "MatrixModels" "/usr/local/lib/R/site-library"
matrixStats "matrixStats" "/usr/local/lib/R/site-library"
minqa "minqa" "/usr/local/lib/R/site-library"
multcomp "multcomp" "/usr/local/lib/R/site-library"
munsell "munsell" "/usr/local/lib/R/site-library"
mvtnorm "mvtnorm" "/usr/local/lib/R/site-library"
nloptr "nloptr" "/usr/local/lib/R/site-library"
pbkrtest "pbkrtest" "/usr/local/lib/R/site-library"
permute "permute" "/usr/local/lib/R/site-library"
plyr "plyr" "/usr/local/lib/R/site-library"
preprocessCore "preprocessCore" "/usr/local/lib/R/site-library"
prettyunits "prettyunits" "/usr/local/lib/R/site-library"
progress "progress" "/usr/local/lib/R/site-library"
pvclust "pvclust" "/usr/local/lib/R/site-library"
quantreg "quantreg" "/usr/local/lib/R/site-library"
R.methodsS3 "R.methodsS3" "/usr/local/lib/R/site-library"
R.oo "R.oo" "/usr/local/lib/R/site-library"
R.utils "R.utils" "/usr/local/lib/R/site-library"
R6 "R6" "/usr/local/lib/R/site-library"
RColorBrewer "RColorBrewer" "/usr/local/lib/R/site-library"
Rcpp "Rcpp" "/usr/local/lib/R/site-library"
RcppEigen "RcppEigen" "/usr/local/lib/R/site-library"
readr "readr" "/usr/local/lib/R/site-library"
reshape2 "reshape2" "/usr/local/lib/R/site-library"
RSQLite "RSQLite" "/usr/local/lib/R/site-library"
S4Vectors "S4Vectors" "/usr/local/lib/R/site-library"
sandwich "sandwich" "/usr/local/lib/R/site-library"
scales "scales" "/usr/local/lib/R/site-library"
SparseM "SparseM" "/usr/local/lib/R/site-library"
stringi "stringi" "/usr/local/lib/R/site-library"
stringr "stringr" "/usr/local/lib/R/site-library"
SummarizedExperiment "SummarizedExperiment" "/usr/local/lib/R/site-library"
TH.data "TH.data" "/usr/local/lib/R/site-library"
tibble "tibble" "/usr/local/lib/R/site-library"
WGCNA "WGCNA" "/usr/local/lib/R/site-library"
xtable "xtable" "/usr/local/lib/R/site-library"
XVector "XVector" "/usr/local/lib/R/site-library"
zlibbioc "zlibbioc" "/usr/local/lib/R/site-library"
zoo "zoo" "/usr/local/lib/R/site-library"
littler "littler" "/usr/lib/R/site-library"
base "base" "/usr/lib/R/library"
boot "boot" "/usr/lib/R/library"
class "class" "/usr/lib/R/library"
cluster "cluster" "/usr/lib/R/library"
codetools "codetools" "/usr/lib/R/library"
compiler "compiler" "/usr/lib/R/library"
datasets "datasets" "/usr/lib/R/library"
foreign "foreign" "/usr/lib/R/library"
graphics "graphics" "/usr/lib/R/library"
grDevices "grDevices" "/usr/lib/R/library"
grid "grid" "/usr/lib/R/library"
KernSmooth "KernSmooth" "/usr/lib/R/library"
lattice "lattice" "/usr/lib/R/library"
MASS "MASS" "/usr/lib/R/library"
Matrix "Matrix" "/usr/lib/R/library"
methods "methods" "/usr/lib/R/library"
mgcv "mgcv" "/usr/lib/R/library"
nlme "nlme" "/usr/lib/R/library"
nnet "nnet" "/usr/lib/R/library"
parallel "parallel" "/usr/lib/R/library"
rpart "rpart" "/usr/lib/R/library"
spatial "spatial" "/usr/lib/R/library"
splines "splines" "/usr/lib/R/library"
stats "stats" "/usr/lib/R/library"
stats4 "stats4" "/usr/lib/R/library"
survival "survival" "/usr/lib/R/library"
tcltk "tcltk" "/usr/lib/R/library"
tools "tools" "/usr/lib/R/library"
utils "utils" "/usr/lib/R/library"

Docker Pull Command
Owner
mfalvarez