MiXCR is a universal software for analysis of raw T- or B- cell receptor repertoire sequencing data.
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FROM adoptopenjdk:11-jre-hotspot
ARG version="3.0.13"
RUN mkdir /work
RUN apt-get update \
&& apt-get install -y unzip \
&& rm -rf /var/lib/apt/lists/* \
&& cd / \
&& curl -s -L -O https://github.com/milaboratory/mixcr/releases/download/v${version}/mixcr-${version}.zip \
&& unzip mixcr-${version}.zip \
&& mv mixcr-${version} mixcr \
&& rm mixcr-${version}.zip
ENV PATH="/mixcr:${PATH}"
WORKDIR /work
ENTRYPOINT ["/bin/bash"]