Neuroscience data analysis with Python
What it gives you
- shell environment with Neo (development version) and Elephant installed.
- IPython, scipy, matplotlib and OpenMPI are also installed.
- use directly or as a base for your own project-specific Docker images.
More analysis tools will be added in future releases, coming soon!
The following command starts a container with the bash shell, running as user
docker run -i -t neuralensemble/analysis /bin/bash
You should then activate the "neurosci" virtual environment:
after which you can run ....
Note that this image does not provide an X11 graphical environment, so GUI tools will not work;
neuralensemble/analysisx image if you need X11.
For documentation of the tools installed in the image, see http://neuralensemble.org/projects/