Public Repository

Last pushed: 2 years ago
Short Description
docker image of soapdenove 2.04 The command is: SOAPdenovo-63mer or SOAPdenovo-127mer
Full Description
>     Mannul :http://soap.genomics.org.cn/soapdenovo.html#comm2
>     
>     Usage:
>     
>     SOAPdenovo-63mer <command> [option]
>     xz
>         pregraph        construct kmer-graph
>         sparse_pregraph construct sparse kmer-graph
>         contig          eliminate errors and output contigs
>         map             map reads to contigs
>         scaff           construct scaffolds
>         all             do pregraph-contig-map-scaff in turn
>     
>     OR:
>     
>     SOAPdenovo-127mer <command> [option]
>     
>         pregraph        construct kmer-graph
>         sparse_pregraph construct sparse kmer-graph
>         contig          eliminate errors and output contigs
>         map             map reads to contigs
>         scaff           construct scaffolds
>         all             do pregraph-contig-map-scaff in turn
Docker Pull Command
Owner
octavianus90

Comments (0)