staphb/salmid
Rapid confirmation of Salmonella spp. and subspp. from sequence data
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This repository contains the Dockerfiles and other assorted files necessary for building Docker images for a variety of programs used by members of the StaPH-B (State Public Health Lab Bioinformatics) consortium. The purpose of this repository is to provide a centralized location for Docker images that is easily accessible for users, with clear documentation on how the containers were built and how to use them.
Each Dockerfile lists author/maintainer for that specific Docker image, but the authors/maintainers of the docker images are:
If you would like to contribute with your own Docker image or perhaps improve upon the existing images, please fork the repository, make your changes/additions, and submit a pull request. If you are having an issue with an existing image, please submit an issue. We welcome any and all feedback!
See more details on how to contribute here
We have also created a user guide that outlines methods and best practices for using and developing docker containers.
Docker User Guide
You can also view the list of images on Docker hub here: https://hub.docker.com/r/staphb/
docker pull staphb/salmid