Public | Automated Build

Last pushed: 2 years ago
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SGA Docker Container

Docker virtualization of a full SGA pipeline – using a modified .dot-verbose version of SGA to enable comparison / evaluation of the single steps in the scaffolding algorithm.

USAGE

  1. Install Docker
  2. Pull automated build of this image: docker pull stpf/sga
  3. Navigate to files and run pipeline docker run -v $(pwd):/input READ_1.fq READ_2.fq (replace filenames accordingly).
Docker Pull Command
Owner
stpf
Source Repository

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