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Last pushed: 2 months ago
Short Description
Neo4j Galaxy IE
Full Description

Neo4jDB_Galaxy_IE

A modified version of the Neo4j:3.1 Docker image to cater for the current Galaxy port_mapping.

This image has been modified to expose a single port(7474).

Build the image:

$ docker build -t quay.io/sanbi-sa/neo_ie:3.1 .

or

Pull the image:

$ docker pull quay.io/sanbi-sa/neo_ie:3.1

Try make sure you have nodejs v0.10.45 and that you can run $ node (you might have to set a symlink)

$ apt-cache policy nodejs
nodejs:
  Installed: 0.10.45-1nodesource1~trusty1
  Candidate: 0.10.45-1nodesource1~trusty1
  Version table:
 *** 0.10.45-1nodesource1~trusty1 0
        500 https://deb.nodesource.com/node/ trusty/main amd64 Packages
        100 /var/lib/dpkg/status
$ node -v
v0.10.45

Set interactive_environment_plugins_directory to config/plugins/interactive_environments in config/galaxy.ini

Next, follow in the galaxy folder to get the Neo4j IE installed.

Then, setup your proxy accordingly.

You should the see the image below upon firing up the IE:

Thanks to @bgruening and @erasche.

For interest's sake, to run this:

$ docker run -d \
    -p 7474:7474 \
    -v /tmp/data:/data \
    -e NEO4J_AUTH=none -e USER_UID=$(id -u) -e USER_GID=$(id -g) \
    quay.io/sanbi-sa/neo_ie:3.1
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Owner
thoba
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