Public | Automated Build

Last pushed: 2 months ago
Short Description
Docker container with Snippy software
Full Description

docker-snippy_tseemann

Docker container with Snippy software.

Usage

You can download and run this image using the following commands:

docker pull ummidock/snippy_tseemann:3.1
docker run --rm -u $(id -u):$(id -g) -it -v /local/folder/data:/data/ ummidock/snippy_tseemann:3.1 snippy --cpus 1 --cleanup --outdir /data/sample/ --ref /data/ref.gbk --pe1 /data/sample_1.fastq.gz --pe2 /data/sample_2.fastq.gz
Docker Pull Command
Owner
ummidock
Source Repository

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