FROM continuumio/anaconda3

RUN apt-get update

# Install software dependencies
RUN apt-get -y install graphviz
RUN pip install radnlp==0.2.0.8
RUN pip install seaborn==0.7.1
RUN pip install pydotplus
RUN pip install nltk

# Install jupyter notebook
RUN /opt/conda/bin/conda install jupyter -y --quiet 
RUN /opt/conda/bin/python -m nltk.downloader -d /usr/local/share/nltk_data all

RUN mkdir /code
RUN mkdir /data

# Add the code
ADD . /code
WORKDIR /code/pefinder

# Clean up
RUN apt-get autoremove -y
RUN apt-get clean
RUN rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
RUN chmod u+x /code/pefinder/cli.py

ENTRYPOINT ["python","/code/pefinder/cli.py"]