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Last pushed: 4 months ago
Short Description
OpenMS container for testing
Full Description

This is a testing/development installation of OpenMS (https://github.com/OpenMS/OpenMS) with most optional tools installed as well - all in /usr/local. Running the container on a Linux host can be easily done with a script like:


#!/bin/bash
SRC_DATA_PATH=/data/openms/in
RES_DATA_PATH=/data/openms/out

docker run -it -v $SRC_DATA_PATH:/data \
-v $RES_DATA_PATH:/res \
-v /tmp/.X11-unix:/tmp/.X11-unix \
-e DISPLAY \
--device /dev/dri \
--device /dev/input \
vladpopovici/openms:latest


In case of errors running the GUI applications, use "xhost +" on the host. Note that this is not very secure, look for better alternatives if you want.

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vladpopovici

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