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Last pushed: 2 years ago
Short Description
sequenceiq/spark:1.3.0 with maven and adam 0.16.0
Full Description

This image was built from the following Dockerfile:

FROM sequenceiq/spark:1.3.0
RUN yum install -y mod_dav_svn subversion
RUN yum install -y git
RUN yum install -y wget
# download and install maven for building ADAM
RUN wget http://apache.mirrors.pair.com/maven/maven-3/3.3.3/binaries/apache-maven-3.3.3-bin.tar.gz
RUN tar -zxvf apache-maven-3.3.3-bin.tar.gz
RUN ln -s apache-maven-3.3.3 maven
ENV PATH=$PATH:/maven/bin
# download ADAM and install
WORKDIR opt
RUN git clone https://github.com/bigdatagenomics/adam.git
WORKDIR adam
ENV MAVEN_OPTS="-Xmx512m -XX:MaxPermSize=128m"
RUN mvn clean package -e -DskipTests
ENV PATH=$PATH:/opt/adam/bin
WORKDIR /
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weiyi

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