4geniac/almalinux repository overview

Geniac is an Automatic Configuration GENerator and Installer for nextflow pipeline.

This repository provides the containers based on the AlmaLinux⁠ Linux distribution. These containers can be used by geniac⁠ to build the docker and singularity containers for each tool in a Nextflow pipeline.

⁠Resources

• The geniac documentation⁠ provides a set of best practises to implement Nextflow pipelines.
• The geniac⁠ source code provides the set of utilities.
• The geniac demo⁠ provides a toy pipeline to test and practise Geniac.
• The geniac template⁠ provides a pipeline template to start a new pipeline.
• The 4geniac⁠ docker hub registry with the containers used by geniac.

⁠Citation

Allain F, Roméjon J, La Rosa P et al. Geniac: Automatic Configuration GENerator and Installer for nextflow pipelines. Open Research Europe 2022, 1:76⁠