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adgh456/ngs-main

By adgh456

•Updated over 8 years ago

contain NGS reference genome, annotation database and some scripts.

Image
0

221

adgh456/ngs-main repository overview

⁠wes

  • genome coordinate：ucsc.hg19.fasta
  • dbSNP：dbsnp_138.hg19.vcf
  • COSMIC：CosmicAllMutsHeaderSorted.vcf

⁠wes_v2

  • genome coordinate：ucsc.hg19.fasta
  • dbSNP：dbsnp_138.hg19.vcf
  • COSMIC：CosmicAllMutsHeaderSorted.vcf
  • seq_bed: agilent_region_OSCC_hg19_rmheader.bed

⁠wes_v3

  • genome coordinate: ucsc.hg19.fasta
  • dbSNP: dbsnp_138.hg19.vcf
  • COSMIC: CosmicAllMutsHeaderSorted.vcf
  • seq_bed: agilent_region_OSCC_hg19_rmheader.bed
  • gnomAD: gnomad.exomes.r2.0.2.rename.vcf.gz

Tag summary

Content type

Image

Digest

Size

14.3 GB

Last updated

over 8 years ago

docker pull adgh456/ngs-main:wes_v3