agladstein/msprime repository overview

FROM opensciencegrid/osgvo-ubuntu-18.04:latest

#maintainer "Ariella Gladstein <[email protected]>"
#organization "University of North Carolina at Chapel Hill"
#department "Genetics"
#date "28 November 2018"
#application "Genomic simulations with msprime"


RUN apt-get update && apt-get install -y --no-install-recommends \
            build-essential \
            git \
            libgsl-dev \
            python3 \
            python3-dev \
            python3-pip \
            vim \
            wget \
            && \
    apt-get clean && \
    rm -rf /var/lib/apt/lists/*

RUN pip3 install setuptools

# Install msprime
RUN pip3 install msprime

# build info
RUN echo "Timestamp:" `date --utc` | tee /image-build-info.txt