RNA-seq data analysis for short or long reads.
1.5K
Download genome data from NCBI-Datasets genome with Datasets-cli
Quality Control with fastQC or falco
Trimming with Trim_galore (manual) & fastQC & multiQC
Alignment to annotated genome with HISAT2
SAM & BAM file manipulation with SAMtools
Gene Count with featureCounts
Content type
Image
Digest
sha256:5f8b25c77…
Size
811.6 MB
Last updated
about 1 year ago
docker pull agus3260/rnaseq