andreaswilm/lofreq repository overview

This is the official docker image for LoFreq Star (AKA LoFreq version 2), a sensitive variant calling program.

The image is based on Ubuntu also contains samtools/htslib 1.1 as well as required dependencies for building and running samtools and LoFreq.

See https://github.com/CSB5/lofreq⁠ for the LoFreq source on github and http://csb5.github.io/lofreq/⁠ for LoFreq's website.