andypohl/shiny-brain repository overview

⁠shiny-brain

Example of an RStudio Shiny app navigating MRI images.

⁠Strategy:

• Augment rocker/shiny docker image with R brain imaging libraries like BrainR, fslr, etc.
• Shiny docker container run like (from within app dir):

$ docker run -d -v $(pwd -P):/srv/shiny-server/shiny-brain -p 3838:3838 andypohl/shiny-brain

(going to http://docker-ip:3838/shiny-brain⁠ runs the app)

• the app/ subdirectory contains everything for the app apart from data.
• the data (NIfTI images), should go in the app/data directory.