ashander/phenoecosim repository overview

⁠phenoecosim

⁠Simulations of eco-evo trait and demographic dynamics under changing environments

Jaime Ashander and Luis-Miguel Chevin

Simulate evolutionary, plastic, and ecological responses to changing environments, including discrete shifts and constantly moving optima.

Built with Armadillo⁠ and Rcpp⁠ (via RcppArmadillo package).

Please cite as

Jaime Ashander and Luis-Miguel Chevin (2015). phenoecosim: Simulations of eco-evo trait and demographic dynamics under changing environments. R package version v0.1.0.

⁠Running in docker

This package includes a Dockerfile built on top of the rocker/rstudio image. We have also hosted the image on dockerhub, so you can easily get an Rstudio server setup for development running on the cloud:

docker run -d -p 80:8787 -e USER=<username> -e PASSWORD=<password> ashander/phenoecosim

Navigating to the public DNS of the server will give you an Rstudio login screen.

For further details see the rocker wiki⁠