Usage: construct.sh cytoband genenames fasta GTF reference_dir
Required files: Fasta (.fa) could be .gz Ensemble gtf >=68 Cytoband: (http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/cytoBand.txt.gz) genenames: www.genenames.org -> Downloads -> Complete HGNC datase. (txt)
Content type
Image
Digest
Size
113.8 MB
Last updated
almost 11 years ago
docker pull avkitex/soapfuse-ref