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benmack/r-oneclass-deps

By benmack

•Updated over 7 years ago

rocker/geospatial + dependencies (except maxent.jar) needed for R oneClass package (only on github).

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benmack/r-oneclass-deps repository overview

rocker/geospatial + dependencies (except maxent.jar) needed for R oneClass package (only on github).

⁠Enhancements

This image was setup fast and is not optimized at all. The following more tricky things could be improved in the future.

⁠Slimmer image

rocker/geospatial brings a lot of packages and features that are actually not required for oneClass. It could be thus reduced to make it as slim as possible.

⁠Include maxent.jar and make it work

But there seems to be an issue. When trying

> oc <- trainOcc ( x = tr.x, y = tr.y, 
+                  method="maxent")
+ Fold01: fc=D, beta= 0.5 
Apr 06, 2019 7:37:38 PM java.util.prefs.FileSystemPreferences$1 run
INFO: Created user preferences directory.
model fit failed for Fold01: fc=D, beta= 0.5 Error in rJava::.jcall(mxe, "S", "fit", c("autorun", "-e", afn, "-o",  : 
  java.awt.AWTError: Can't connect to X11 window server using ':0' as the value of the DISPLAY variable.
 
- Fold01: fc=D, beta= 0.5 
+ Fold01: fc=D, beta= 1.0 
model fit failed for Fold01: fc=D, beta= 1.0 Error in rJava::.jcall(mxe, "S", "fit", c("autorun", "-e", afn, "-o",  : 
  java.lang.NullPointerException

Tag summary

Content type

Image

Digest

Size

1.5 GB

Last updated

over 7 years ago

docker pull benmack/r-oneclass-deps:3.5.3