bicore/vgt_pcp repository overview

The docker has the following:

1. R v4.2.0 installed
2. ArchR version 1.0.2
3. MACS2 installed
4. RStudio installed
5. Reference genomes for Human, Mouse, Macaque and Pig have been installed as well.

You can load the peak calling pipeline library in the R console, simply by library(peakCallingPipeline)

The singularity image has been already downloaded here: /allen/programs/celltypes/workgroups/rnaseqanalysis/bicore/singularity/vgt_pcp_0.1.sif