biodockers/miniconda3 repository overview

# Phase 1: Building an environment
FROM biodockers/miniconda3:latest as builder

# Create a conda environment and install the software
RUN conda create -p /opt/conda/envs/tmp_envs bioconda::seqkit && \
    conda clean -afy

# Phase 2: Generating the final image
FROM biodockers/alpine:latest

# Copy the Conda environment only
COPY --from=builder /opt/conda/envs/tmp_envs /opt/conda

# Setting Environment Variables
ENV PATH=/opt/conda/bin:$PATH
ENV LANG=C.UTF-8

# verification
CMD ["seqkit", "--help"]