bioedge/jbrowse repository overview

Configurable docker image for GMOD's JBrowse⁠.

http://jbrowse.org/⁠

This docker image allows customization of loaded data;

⁠Mount point

Data can be provided to the container via a mount and launch the JBrowse instance in background (-d).

$ docker run -d -p 8080:8080 -v `pwd`/my-data/:/jbrowse/data/ bioedge/jbrowse

• homepage: http://localhost:8080/⁠
• sample dataset: http://localhost:8080/?data=sample_data/json/volvox⁠
• user dataset: http://localhost:8080/?data=data/project1⁠
• example: http://localhost:8080/?data=data/2019-nCoV⁠

⁠Structure of Jbrowse tracks info by project.

In the host

`pwd`/my-data/project1/
  - names
  - seq
  - trackList.json
  - tracks
  - tracks.conf