bioinfoipec/raxml repository overview

⁠RAxML

This image facilitates the usage of RAxML⁠, that is a program for sequential and parallel Maximum Likelihood based inference of large phylogenetic trees. It can also be used for post- analyses of sets of phylogenetic trees, analyses of alignments and, evolutionary placement of short reads.

⁠Using RAxML image

In order to use this image you need to run the folliwing command: docker run --rm -v /your/data/dir:/data bioinfoipec/raxml RAxML <arguments>

See the MANUAL⁠, for more details.

To obtain help of an tool usage, you just need to run: docker run --rm bioinfoipec/raxml RAxML -h.

⁠Test data

To test the previous command, you can access the following link⁠.