Image for Single-Cell RNA-Seq data using R
10K+
| Module | Version |
|---|---|
| magic-impute | 1.3.0 |
| phate | 0.2.9 |
| Package | Version |
|---|---|
| annotate | 1.58.0 |
| AUCell | 1.2.4 |
| beachmat | 1.2.1 |
| biomaRt | 2.36.1 |
| bookdown | 0.7 |
| BPSC | 0.99.2 |
| circlize | 0.4.4 |
| clustree | 0.2.2 |
| ComplexHeatmap | 1.18.1 |
| corrplot | 1.6.9 |
| cowplot | 0.9.3 |
| crayon | 1.3.4 |
| DESeq2 | 1.20.0 |
| destiny | 2.10.2 |
| devtools | 1.13.6 |
| dplyr | 0.7.6 |
| EDASeq | 2.14.1 |
| edgeR | 3.22.5 |
| genefilter | 1.62.0 |
| geneplotter | 1.58.0 |
| GenomicFeatures | 1.32.3 |
| ggbeeswarm | 0.6.0 |
| ggforce | 0.1.3 |
| ggfortify | 0.4.5 |
| ggplot2 | 3.0.0 |
| ggraph | 1.0.2 |
| ggthemes | 4.0.1 |
| git2r | 0.23.0 |
| googleVis | 0.6.2 |
| GSEABase | 1.42.0 |
| GSVA | 1.28.0 |
| kBET | 0.99.5 |
| knitr | 1.20 |
| limma | 3.36.5 |
| lle | 1.1 |
| M3Drop | 3.09.00 |
| MAST | 1.6.1 |
| matrixStats | 0.54.0 |
| mclust | 5.4.1 |
| monocle | 2.8.0 |
| MultiAssayExperiment | 1.6.0 |
| mvoutlier | 2.0.9 |
| ouija | 0.99.0 |
| pcaMethods | 1.72.0 |
| pcaReduce | 1.0 |
| penalized | 0.9-51 |
| phateR | 0.2.9 |
| pheatmap | 1.0.10 |
| png | 0.1-7 |
| RColorBrewer | 1.1-2 |
| RCurl | 1.95-4.11 |
| Rhdf5lib | 1.2.1 |
| Rmagic | 1.3.0 |
| ROCR | 1.0-7 |
| rtracklayer | 1.40.6 |
| Rtsne | 0.13 |
| RUVSeq | 1.14.0 |
| SC3 | 1.8.0 |
| scater | 1.8.4 |
| scde | 2.8.0 |
| scfind | 1.2.0 |
| scImpute | 0.0.9 |
| scmap | 1.2.0 |
| scran | 1.8.4 |
| scRNA.seq.funcs | 0.1.0 |
| Seurat | 2.3.4 |
| SingleCellExperiment | 1.2.0 |
| SingleR | 0.2.0 |
| SLICER | 0.2.0 |
| statmod | 1.4.30 |
| stringr | 1.3.1 |
| SummarizedExperiment | 1.10.1 |
| sva | 3.28.0 |
| tidyverse | 1.2.1 |
| TSCAN | 1.18.0 |
| XML | 3.98-1.16 |
Content type
Image
Digest
Size
1.4 GB
Last updated
almost 8 years ago
docker pull bitless/scrnaseq